Go aftermarket. Youll need a remap or it will ride ...... at low rpm's of the power band. If you want to stay factory, I saw an up map for the full system on ebay. You could probably get it for under $300. (OBO option)
Nikkit, try the RapidBike module. It comes with maps for the full system and continuouy updates while you ride. Contact Cycle Pro. The thread below explains the software as well.
Hi Nikki - what system is it exactly? Is it the aftermarket from ducati performance or a race system from corse? I see you are in Ireland (obviously don't know where) but Millsport (they are the team running in BSB with Moto Rapido who are building my bike) - would be able to help - ideally you should have a custom system done with the bike on a dyno.