I have owned 35+ Motorcycles over the last 20+ years and I have broken every single one of them in the exact same way and have NEVER had a problem with ANY of the engines. My BMW S1000RR did 53,000+ miles in a little over 3 years and a ton of trackdays, some at Thunderhill raceway in 107+ degrees F.
At 53,000 miles, my BMW dynoed at 184.6 RWHP; the compression figures were identical to a brand new bike on all 4 cylinders, it never used a drop of oil and nor have any of my other bikes.
I break all of my motorcycles in the same way: Ride relatively gently (keep rpm under 8-10,000 rpm for the first 100 or so miles, then ride it like I normally would ride on a spirited weekend ride..
BOTH the Ducati dealers that I go to gave me the exact same advice, which was "ride it gently for the first full tank of gas, then ride like you normally would". That is the exact same advice I got on all 5 of my Triumph Daytonas, including the "R" we have right now, which just had a Blackstone Labs report done on it with 19,000+ plus miles on it... The results were really good for a 19,000 mile triple.
The bottom line is that not only I, but also multiple dealerships recommend the method I use and it has paid off 100% for me so far.