My bike is still at Boulder Motorsports undergoing a series of troubleshooting steps that so far have yielded no results (change in shift arm angle, different QS, different shift rod types/lengths, back to original throttle, many more tire calibrations). When I went to test ride it, the bike wouldn't downshift from 4th at the 1st attempt which wasn't a good sign. While on the test ride I also changed ride modes and turned off rear ABS then reset tire cal to default, powered off for a few, then did a live tire cal again. Bike still won't downshift from 6 or 5 at all, and 4th maybe half the time. BTW, we have perfect voltage readings to the ECU in all positions up/down (verified by myself and the technician).
The really odd thing is that 3-2-1 is absolute butter 100% of the time with no issues at all, and upshifts are perfect. Explain to me how this can possibly be a mechanical issue if that is the case.
At this point it looks like I may have to return the bike to its fully original state over the Winter and see what I get. If it still is not functioning properly I may have to put in a lemon claim, or find out more about aftermarket harnesses/ECUs